PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0373s0021.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 345aa    MW: 37884.1 Da    PI: 8.2187
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0373s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.23.3e-32220273255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Kalax.0373s0021.1.p 220 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 273
                          9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-15217274IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.5E-29218274IPR009057Homeodomain-like
TIGRFAMsTIGR015577.3E-24220273IPR006447Myb domain, plants
PfamPF002494.6E-7221272IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MPINSQSDTA MVVPDLDLHI SLLPNTVVAS SSSLSTSSIY CREEPDTELS LLPSSSETEN  60
LWRQQQQQQK TSSSSTLGLD EAAKNPNRSL HFCPSFPGGR QVTANTYQQY VPDEGWNSKP  120
IKGIPIYNQS CSSSSASSLC SSNPSFGGLL RLNGISMEAI RQPQQQFQYL RSCSSNQQYL  180
GIVAPGGHST NGIAPEVNGG VLRSRFMLPK IQNRRNVRAP RMRWTSSLHA RFVHAVELLG  240
GHERATPKSV LELMDVKDLT LAHVKSHLQM YRTVKSTDRP AASSDGSGDE AFSHMEESRG  300
STADKREIAK ELLSLNEREA VDGSYELNYS ARSNIRSNSN TRYS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006376702.14e-60hypothetical protein POPTR_0012s03900g
RefseqXP_011000707.19e-60PREDICTED: transcription repressor KAN1-like
SwissprotQ93WJ91e-49KAN1_ARATH; Transcription repressor KAN1
TrEMBLU5FWI54e-60U5FWI5_POPTR; Uncharacterized protein
STRINGPOPTR_0012s03900.11e-59(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.13e-48G2-like family protein